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1

A Short Proof of a Theorem of Adjan

Journal:

Proceedings of the American Mathematical Society

Year:

1992

Language:

english

File:

PDF, 141 KB

english, 1992

2

On the descriptive power of special Thue systems

Louxin Zhang, Lian Li, Jinzhao Wu

Journal:

Discrete Mathematics

Year:

1996

Language:

english

File:

PDF, 380 KB

english, 1996

3

Conjugacy in special monoids

Journal:

Journal of Algebra

Year:

1991

Language:

english

File:

PDF, 614 KB

english, 1991

4

Decision problems for finite special string-rewriting systems that are confluent on some congruence class

Friedrich Otto, Louxin Zhang

Journal:

Acta Informatica

Year:

1991

Language:

english

File:

PDF, 2.02 MB

english, 1991

5

Rational strong codes and structure of rational group languages

Journal:

Semigroup Forum

Year:

1986-1987

Language:

english

File:

PDF, 458 KB

english, 1986-1987

6

Small weight bases for hamming codes

John Tromp, Louxin Zhang, Ying Zhao

Journal:

Theoretical Computer Science

Year:

1997

Language:

english

File:

PDF, 551 KB

english, 1997

7

DUPCAR: Reconstructing Contiguous Ancestral Regions with Duplications

Ma, Jian, Ratan, Aakrosh, Raney, Brian J., Suh, Bernard B., Zhang, Louxin, Miller, Webb, Haussler, David

Journal:

Journal of Computational Biology

Year:

2008

Language:

english

File:

PDF, 666 KB

english, 2008

8

Perfect Phylogenetic Networks with Recombination

Wang, Lusheng, Zhang, Kaizhong, Zhang, Louxin

Journal:

Journal of Computational Biology

Year:

2001

Language:

english

File:

PDF, 212 KB

english, 2001

9

Online buffer management for transmitting packets with processing cycles

Yang, Yi-Hua, Liao, Chung-Shou, Han, Xin, Zhang, Louxin

Journal:

Theoretical Computer Science

Year:

2018

Language:

english

File:

PDF, 462 KB

english, 2018

10

Twist–Rotation Transformations of Binary Trees and Arithmetic Expressions

Ming Li, Louxin Zhang

Journal:

Journal of Algorithms

Year:

1999

Language:

english

File:

PDF, 101 KB

english, 1999

11

On the Nearest Neighbour Interchange Distance Between Evolutionary Trees

Ming Li, John Tromp, Louxin Zhang

Journal:

Journal of Theoretical Biology

Year:

1996

Language:

english

File:

PDF, 248 KB

english, 1996

12

The pre-NTS property is undecidable for context-free grammars

Journal:

Information Processing Letters

Year:

1992

Language:

english

File:

PDF, 280 KB

english, 1992

13

Some properties of finite special string-rewriting systems

Journal:

Journal of Symbolic Computation

Year:

1992

Language:

english

File:

PDF, 567 KB

english, 1992

14

Addition in log2n + O(1) steps on average a simple analysis

Richard Beigel, Bill Gasarch, Ming Li, Louxin Zhang

Journal:

Theoretical Computer Science

Year:

1998

Language:

english

File:

PDF, 253 KB

english, 1998

15

Structural properties of the reconciliation space and their applications in enumerating nearly-optimal reconciliations between a gene tree and a species tree

Taoyang Wu, Louxin Zhang

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 231 KB

english, 2011

16

Conversion events in gene clusters

Giltae Song, Chih-Hao Hsu, Cathy Riemer, Yu Zhang, Lim Hie Kim, Federico Hoffmann, Louxin Zhang, Ross C Hardison, NISC Comparative Sequencing Program, Eric D Green, Webb Miller

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 2.55 MB

english, 2011

17

Algorithmic and Complexity Issues of Three Clustering Methods in Microarray Data Analysis

Jinsong Tan, Kok Seng Chua, Louxin Zhang, Song Zhu

Journal:

Year:

2007

Language:

english

File:

PDF, 280 KB

english, 2007

18

The Consecutive Ones Submatrix Problem for Sparse Matrices

Jinsong Tan, Louxin Zhang

Journal:

Year:

2007

Language:

english

File:

PDF, 171 KB

english, 2007

19

Efficient estimation of the accuracy of the maximum likelihood method for ancestral state reconstruction

Bin Ma, Louxin Zhang

Journal:

Journal of Combinatorial Optimization

Year:

2011

Language:

english

File:

PDF, 466 KB

english, 2011

20

Analyzing the Fitch Method for Reconstructing Ancestral States on Ultrametric Phylogenetic Trees

Louxin Zhang, Jian Shen, Jialiang Yang, Guoliang Li

Journal:

Bulletin of Mathematical Biology

Year:

2010

Language:

english

File:

PDF, 285 KB

english, 2010

21

On the approximation of longest common nonsupersequences and shortest common nonsubsequences

Journal:

Theoretical Computer Science

Year:

1995

Language:

english

File:

PDF, 639 KB

english, 1995

22

Sensitivity analysis and efficient method for identifying optimal spaced seeds

Kwok Pui Choi, Louxin Zhang

Journal:

Journal of Computer and System Sciences

Year:

2004

Language:

english

File:

PDF, 249 KB

english, 2004

23

Fitting Distances by Tree Metrics with Increment Error

Bin Ma, Lusheng Wang, Louxin Zhang

Journal:

Journal of Combinatorial Optimization

Year:

1999

Language:

english

File:

PDF, 72 KB

english, 1999

24

Distinguishing string selection problems

J. Kevin Lanctot, Ming Li, Bin Ma, Shaojiu Wang, Louxin Zhang

Journal:

Information and Computation

Year:

2003

Language:

english

File:

PDF, 143 KB

english, 2003

25

Positive correlation between gene coexpression and positional clustering in the zebrafish genome

Yen Kaow Ng, Wei Wu, Louxin Zhang

Journal:

Year:

2009

Language:

english

File:

PDF, 349 KB

english, 2009

26

Genome-scale analysis of positional clustering of mouse testis-specific genes

Quan Li, Bernett TK Lee, Louxin Zhang

Journal:

Year:

2005

Language:

english

File:

PDF, 269 KB

english, 2005

27

A stable iterative method for refining discriminative gene clusters

Min Xu, Mengxia Zhu, Louxin Zhang

Journal:

Year:

2008

Language:

english

File:

PDF, 391 KB

english, 2008

28

From Gene Trees to Species Trees

Ma, Bin, Li, Ming, Zhang, Louxin

Journal:

SIAM Journal on Computing

Year:

2000

Language:

english

File:

PDF, 267 KB

english, 2000

29

Approximating the Spanning Star Forest Problem and Its Application to Genomic Sequence Alignment

Nguyen, C. Thach, Shen, Jian, Hou, Minmei, Sheng, Li, Miller, Webb, Zhang, Louxin

Journal:

SIAM Journal on Computing

Year:

2008

Language:

english

File:

PDF, 230 KB

english, 2008

30

MOTIF DISCOVERY WITH DATA MINING IN 3D PROTEIN STRUCTURE DATABASES: DISCOVERY, VALIDATION AND PREDICTION OF THE U-SHAPE ZINC BINDING ("HUF-ZINC") MOTIF

MAURER-STROH, SEBASTIAN, GAO, HE, HAN, HAO, BAETEN, LIES, SCHYMKOWITZ, JOOST, ROUSSEAU, FREDERIC, ZHANG, LOUXIN, EISENHABER, FRANK

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2013

Language:

english

File:

PDF, 770 KB

english, 2013

31

Two combinatorial optimization problems for SNP discovery using base-specific cleavage and mass spectrometry

Xin Chen, Qiong Wu, Ruimin Sun, Louxin Zhang

Journal:

BMC Systems Biology

Year:

2012

Language:

english

File:

PDF, 329 KB

english, 2012

32

ON THE CONJUGACY PROBLEM FOR ONE-RELATOR MONOIDS WITH ELEMENTS OF FINITE ORDER

Journal:

International Journal of Algebra and Computation

Year:

1992

Language:

english

File:

PDF, 544 KB

english, 1992

33

[Lecture Notes in Computer Science] Computing and Combinatorics Volume 2387 || Bend Minimization in Orthogonal Drawings Using Integer Programming

Ibarra, Oscar H., Zhang, Louxin

Year:

2002

Language:

english

File:

PDF, 178 KB

english, 2002

34

[Lecture Notes in Computer Science] Computing and Combinatorics Volume 2387 || Efficient Algorithms for the Hamiltonian Problem on Distance-Hereditary Graphs

Ibarra, Oscar H., Zhang, Louxin

Year:

2002

Language:

english

File:

PDF, 187 KB

english, 2002

35

Effect of Incomplete Lineage Sorting On Tree-Reconciliation-Based Inference of Gene Duplication

Yu Zheng,, Louxin Zhang,

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2014

Language:

english

File:

PDF, 744 KB

english, 2014

36

Reconstructing Recombination Network from Sequence Data: The Small Parsimony Problem

Nguyen, C.T., Nguyen Bao Nguyen,, Wing-Kin Sung,, Louxin Zhang,

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 298 KB

english, 2007

37

Superiority of Spaced Seeds for Homology Search

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 595 KB

english, 2007

38

Maximum Likelihood Inference of the Evolutionary History of a PPI Network from the Duplication History of Its Proteins

Li, Si, Choi, Kwok Pui, Wu, Taoyang, Zhang, Louxin

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2013

Language:

english

File:

PDF, 639 KB

english, 2013

39

From Gene Trees to Species Trees II: Species Tree Inference by Minimizing Deep Coalescence Events

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2011

Language:

english

File:

PDF, 409 KB

english, 2011

40

[IEEE 2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) - Orlando, FL, USA (2011.02.3-2011.02.5)] 2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) - Network model and efficient method for detecting relative duplications or horizontal gene transfers

Zhang, Louxin, Ng, Yen Kaow, Wu, Taoyang, Zheng, Yu

Year:

2011

Language:

english

File:

PDF, 254 KB

english, 2011

41

[IEEE 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering - Boston, MA, USA (2007.10.14-2007.10.17)] 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering - A Robust Method for Generating Discriminative Gene Clusters

Xu, Min, Zhang, Louxin, Li Joe Zhou, Pei

Year:

2007

Language:

english

File:

PDF, 4.68 MB

english, 2007

42

[Lecture Notes in Computer Science] Computing and Combinatorics Volume 2387 || Polynomial Interpolation of the Elliptic Curve and XTR Discrete Logarithm

Ibarra, Oscar H., Zhang, Louxin

Year:

2002

Language:

english

File:

PDF, 121 KB

english, 2002

43

[Lecture Notes in Computer Science] Computing and Combinatorics Volume 2387 ||

Ibarra, Oscar H., Zhang, Louxin

Year:

2002

Language:

english

File:

PDF, 7.63 MB

english, 2002

44

[Lecture Notes in Computer Science] Computing and Combinatorics Volume 2387 || The Conditional Location of a Median Path

Ibarra, Oscar H., Zhang, Louxin

Year:

2002

Language:

english

File:

PDF, 169 KB

english, 2002

45

Are the Duplication Cost and Robinson-Foulds Distance Equivalent?

Zheng, Yu, Zhang, Louxin

Journal:

Journal of Computational Biology

Year:

2014

Language:

english

File:

PDF, 2.79 MB

english, 2014

46

On a Mirkin-Muchnik-Smith Conjecture for Comparing Molecular Phylogenies

Journal:

Journal of Computational Biology

Year:

1997

Language:

english

File:

PDF, 1.08 MB

english, 1997

47

Quick, Practical Selection of Effective Seeds for Homology Search

Preparata, Franco P., Zhang, Louxin, Choi, Kwok Pui

Journal:

Journal of Computational Biology

Year:

2005

Language:

english

File:

PDF, 205 KB

english, 2005

48

Optimal Bounds for Matching Routing on Trees

Journal:

SIAM Journal on Discrete Mathematics

Year:

1999

Language:

english

File:

PDF, 317 KB

english, 1999

49

[IEEE Comput. Soc IEEE Computer Society Bioinformatics Conference - Stanford, CA, USA (14-16 Aug. 2002)] Proceedings. IEEE Computer Society Bioinformatics Conference - A new clustering method for microarray data analysis

Louxin Zhang,, Song Zhu,

Year:

2002

Language:

english

File:

PDF, 346 KB

english, 2002

50

Spectrum-Based De Novo Repeat Detection in Genomic Sequences

Do, Huy Hoang, Choi, Kwok Pui, Preparata, Franco P., Sung, Wing Kin, Zhang, Louxin

Journal:

Journal of Computational Biology

Year:

2008

Language:

english

File:

PDF, 326 KB

english, 2008

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